ctcRbase

Entry Detail

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General Information

Database ID: SKCM06183 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: ATXN2L Full Name: ataxin 2 like Category: mRNA Synonyms: A2D|A2LG|A2LP|A2RP Chromosome: chr16 Strand: + Coordinate: Start Site(bp): 28823035 End Site(bp): 28837237 Gene Summary: This gene encodes an ataxin type 2 related protein of unknown function. This protein is a member of the spinocerebellar ataxia (SCAs) family, which is associated with a complex group of neurodegenerative disorders. Several alternatively spliced transcripts encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2008] External Links: Ensembl ID: ENSG00000168488 HGNC ID: HGNC:31326 Entrez Gene: 11273

Expression Profile of ATXN2L Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-184 YES YES NO hsa-miR-18a-5p YES YES YES hsa-miR-18b-5p YES YES YES hsa-miR-26a-5p YES YES NO hsa-miR-28-5p YES YES NO hsa-miR-31-5p YES YES NO hsa-miR-328-3p YES YES NO hsa-miR-339-5p YES YES NO hsa-miR-340-5p YES YES NO hsa-miR-342-3p YES YES NO hsa-miR-34a-5p YES YES NO hsa-miR-34c-5p YES YES NO hsa-miR-376c-3p YES YES NO hsa-miR-377-3p YES YES NO hsa-miR-449a YES YES NO hsa-miR-449b-5p YES YES NO hsa-miR-455-5p YES YES NO hsa-miR-491-5p YES YES NO hsa-miR-708-5p YES YES NO Display: