ctcRbase

Entry Detail

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General Information

Database ID: SKCM06193 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: CUX1 Full Name: cut like homeobox 1 Category: mRNA Synonyms: CASP|CDP|CDP/Cut|CDP1|COY1|CUTL1|CUX|Clox|Cux/CDP|GOLIM6|Nbla10317|p100|p110|p200|p75 Chromosome: chr7 Strand: + Coordinate: Start Site(bp): 101815904 End Site(bp): 102283957 Gene Summary: The protein encoded by this gene is a member of the homeodomain family of DNA binding proteins. It may regulate gene expression, morphogenesis, and differentiation and it may also play a role in the cell cycle progession. Several alternatively spliced transcript variants encoding different isoforms have been identified.[provided by RefSeq, Feb 2011] External Links: Ensembl ID: ENSG00000257923 HGNC ID: HGNC:2557 Entrez Gene: 1523

Expression Profile of CUX1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-122-5p YES YES YES hsa-miR-129-5p YES YES NO hsa-miR-140-3p YES NO YES hsa-miR-155-5p YES YES YES hsa-miR-19a-3p YES YES NO hsa-miR-19b-3p YES YES NO hsa-miR-216a-5p YES NO YES hsa-miR-216b-5p YES YES YES hsa-miR-223-3p YES YES YES hsa-miR-299-3p YES YES YES hsa-miR-299-5p YES NO YES hsa-miR-302a-3p YES NO YES hsa-miR-302b-3p YES NO YES hsa-miR-302c-3p YES NO YES hsa-miR-302d-3p YES NO YES hsa-miR-302e YES NO YES hsa-miR-320a YES YES YES hsa-miR-320b YES YES YES hsa-miR-320c YES YES YES hsa-miR-320d YES YES YES hsa-miR-372-3p YES NO YES hsa-miR-373-3p YES NO YES hsa-miR-376c-3p YES YES YES hsa-miR-495-3p YES YES YES hsa-miR-501-3p YES NO YES hsa-miR-502-3p YES NO YES hsa-miR-520a-3p YES NO YES hsa-miR-520b YES NO YES hsa-miR-520c-3p YES NO YES hsa-miR-520d-3p YES NO YES hsa-miR-520e YES NO YES hsa-miR-652-3p YES NO YES hsa-miR-874-3p YES YES YES Display: