ctcRbase

Entry Detail

---



General Information

Database ID: SKCM06253 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: SF3A1 Full Name: splicing factor 3a subunit 1 Category: mRNA Synonyms: PRP21|PRPF21|SAP114|SF3A120 Chromosome: chr22 Strand: - Coordinate: Start Site(bp): 30331988 End Site(bp): 30356947 Gene Summary: This gene encodes a subunit of the splicing factor 3a protein complex. The splicing factor 3a heterotrimer is a component of the mature U2 small nuclear ribonucleoprotein particle (snRNP). U2 small nuclear ribonucleoproteins play a critical role in spliceosome assembly and pre-mRNA splicing. [provided by RefSeq, Aug 2014] External Links: Ensembl ID: ENSG00000099995 HGNC ID: HGNC:10765 Entrez Gene: 10291

Expression Profile of SF3A1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-128-3p YES YES NO hsa-miR-1297 YES YES NO hsa-miR-1298-5p YES NO YES hsa-miR-193a-3p YES YES NO hsa-miR-193b-3p YES YES NO hsa-miR-26a-5p YES YES NO hsa-miR-26b-5p YES YES NO hsa-miR-27a-3p YES YES NO hsa-miR-27b-3p YES YES NO hsa-miR-28-5p YES YES YES hsa-miR-330-5p YES YES NO hsa-miR-488-3p YES YES NO hsa-miR-491-5p YES YES NO hsa-miR-708-5p YES YES YES Display: