Entry Detail



General Information

Database ID:SKCM06287
Cancer Type:melanoma
Dataset:GSE38495
CTCs/CTM Isolation Method:immunomagnetic purification



Gene Information

ncRNA Symbol:NSD1
Full Name:nuclear receptor binding SET domain protein 1
Category:mRNA
Synonyms:ARA267|KMT3B|SOTOS|SOTOS1|STO
Chromosome:chr5
Strand:+
Coordinate:
Start Site(bp):177133025End Site(bp):177300215
Gene Summary:This gene encodes a protein containing a SET domain, 2 LXXLL motifs, 3 nuclear translocation signals (NLSs), 4 plant homeodomain (PHD) finger regions, and a proline-rich region. The encoded protein enhances androgen receptor (AR) transactivation, and this enhancement can be increased further in the presence of other androgen receptor associated coregulators. This protein may act as a nucleus-localized, basic transcriptional factor and also as a bifunctional transcriptional regulator. Mutations of this gene have been associated with Sotos syndrome and Weaver syndrome. One version of childhood acute myeloid leukemia is the result of a cryptic translocation with the breakpoints occurring within nuclear receptor-binding Su-var, enhancer of zeste, and trithorax domain protein 1 on chromosome 5 and nucleoporin, 98-kd on chromosome 11. Multiple transcript variants encoding distinct isoforms have been identified for this gene. [provided by RefSeq, Sep 2018]
External Links:
Ensembl ID:ENSG00000165671
HGNC ID:HGNC:14234
Entrez Gene:64324



Expression Profile of NSD1 Gene

 







Regulatory Relationship

mRNA targets:NA
miRNA targets:
miRNA NamePITAmiRandaRNAhybrid
hsa-miR-101-3p
NO
YES
YES
hsa-miR-144-3p
NO
YES
YES
hsa-miR-148a-3p
NO
NO
YES
hsa-miR-148b-3p
NO
NO
YES
hsa-miR-152-3p
NO
NO
YES
hsa-miR-186-5p
NO
YES
YES
hsa-miR-194-5p
NO
YES
YES
hsa-miR-27a-3p
NO
YES
YES
hsa-miR-27b-3p
NO
YES
YES
hsa-miR-29a-3p
NO
YES
YES
hsa-miR-29b-3p
NO
YES
YES
hsa-miR-29c-3p
NO
YES
YES
hsa-miR-342-3p
NO
YES
YES
hsa-miR-34a-5p
NO
YES
YES
hsa-miR-34c-5p
NO
YES
YES
hsa-miR-377-3p
NO
YES
YES
hsa-miR-449a
NO
YES
YES
hsa-miR-449b-5p
NO
YES
YES
hsa-miR-625-5p
YES
NO
NO
hsa-miR-876-5p
NO
YES
YES
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