ctcRbase

Entry Detail

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General Information

Database ID: SKCM06358 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: SLC30A4 Full Name: solute carrier family 30 member 4 Category: mRNA Synonyms: ZNT4|znT-4 Chromosome: chr15 Strand: - Coordinate: Start Site(bp): 45479611 End Site(bp): 45522807 Gene Summary: Zinc is the second most abundant trace metal in the human body. It is an essential element, serving both a structural role, as in the formation of zinc fingers in DNA-binding proteins, and a catalytic role in metalloenzymes, such as pancreatic carboxypeptidases (e.g., MIM 114852), alkaline phosphatases (e.g., MIM 171760), various dehydrogenases, and superoxide dismutases (e.g., MIM 147450). SLC30A4, or ZNT4, belongs to the ZNT family of zinc transporters. ZNTs are involved in transporting zinc out of the cytoplasm and have similar structures, consisting of 6 transmembrane domains and a histidine-rich cytoplasmic loop (Huang and Gitschier, 1997 [PubMed 9354792]).[supplied by OMIM, Mar 2008] External Links: Ensembl ID: ENSG00000104154 HGNC ID: HGNC:11015 Entrez Gene: 7782

Expression Profile of SLC30A4 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-let-7a-5p YES NO YES hsa-let-7b-5p YES NO YES hsa-let-7c-5p YES NO YES hsa-let-7d-5p YES NO YES hsa-let-7e-5p YES NO YES hsa-let-7f-5p YES NO YES hsa-let-7g-5p YES NO YES hsa-let-7i-5p YES NO YES hsa-miR-124-3p YES NO YES hsa-miR-134-5p YES YES YES hsa-miR-142-5p YES NO YES hsa-miR-15a-5p YES YES NO hsa-miR-15b-5p YES YES NO hsa-miR-16-5p YES YES NO hsa-miR-195-5p YES YES NO hsa-miR-219a-5p YES YES YES hsa-miR-26b-5p YES YES NO hsa-miR-30a-5p YES YES YES hsa-miR-30b-5p YES YES YES hsa-miR-30c-5p YES YES YES hsa-miR-30d-5p YES YES YES hsa-miR-30e-5p YES YES YES hsa-miR-340-5p YES YES YES hsa-miR-374a-5p YES YES NO hsa-miR-424-5p YES YES NO hsa-miR-494-3p YES YES YES hsa-miR-497-5p YES YES NO hsa-miR-506-3p YES NO YES hsa-miR-98-5p YES NO YES Display: