ctcRbase

Entry Detail

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General Information

Database ID: SKCM06382 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: ADAT1 Full Name: adenosine deaminase, tRNA specific 1 Category: mRNA Synonyms: HADAT1 Chromosome: chr16 Strand: - Coordinate: Start Site(bp): 75596981 End Site(bp): 75623300 Gene Summary: This gene is a member of the ADAR (adenosine deaminase acting on RNA) family. Using site-specific adenosine modification, proteins encoded by these genes participate in the pre-mRNA editing of nuclear transcripts. The protein encoded by this gene, tRNA-specific adenosine deaminase 1, is responsible for the deamination of adenosine 37 to inosine in eukaryotic tRNA. Alternatively spliced transcript variants have been described. [provided by RefSeq, Jul 2010] External Links: Ensembl ID: ENSG00000065457 HGNC ID: HGNC:228 Entrez Gene: 23536

Expression Profile of ADAT1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-1297 YES YES YES hsa-miR-149-5p YES NO YES hsa-miR-186-5p YES YES NO hsa-miR-196a-5p YES YES NO hsa-miR-196b-5p YES YES NO hsa-miR-26a-5p YES YES YES hsa-miR-26b-5p YES YES YES hsa-miR-320a YES YES NO hsa-miR-320b YES YES NO hsa-miR-320c YES YES NO hsa-miR-320d YES YES NO hsa-miR-384 YES YES NO hsa-miR-875-5p YES YES NO Display: