ctcRbase

Entry Detail

---



General Information

Database ID: SKCM06409 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: ZNRF1 Full Name: zinc and ring finger 1 Category: mRNA Synonyms: NIN283 Chromosome: chr16 Strand: + Coordinate: Start Site(bp): 74999030 End Site(bp): 75110994 Gene Summary: This gene encodes an E3 ubiquitin-protein ligase that plays a role in neural-cell differentiation. Overexpression of this gene causes neurite-like elongation. The encoded protein contains both a zinc finger and a RING finger motif and is localized in the endosome/lysosome compartment, indicating that it may be involved in ubiquitin-mediated protein modification, and in synaptic vessicle membranes in neurons. [provided by RefSeq, Feb 2012] External Links: Ensembl ID: ENSG00000186187 HGNC ID: HGNC:18452 Entrez Gene: 84937

Expression Profile of ZNRF1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-1197 YES NO YES hsa-miR-1271-5p YES NO YES hsa-miR-129-5p YES YES NO hsa-miR-138-5p YES YES NO hsa-miR-141-3p YES YES NO hsa-miR-148a-3p YES YES YES hsa-miR-148b-3p YES YES YES hsa-miR-150-5p YES YES NO hsa-miR-152-3p YES YES YES hsa-miR-182-5p YES YES YES hsa-miR-200a-3p YES YES NO hsa-miR-30a-5p YES YES YES hsa-miR-30b-5p YES YES YES hsa-miR-30c-5p YES YES YES hsa-miR-30d-5p YES YES YES hsa-miR-30e-5p YES YES YES hsa-miR-365a-3p YES YES YES hsa-miR-371a-5p YES YES YES hsa-miR-374a-5p YES YES NO hsa-miR-374b-5p YES YES NO hsa-miR-410-3p YES YES YES hsa-miR-532-5p YES NO YES hsa-miR-543 YES YES NO hsa-miR-545-3p YES NO NO hsa-miR-874-3p YES NO YES hsa-miR-96-5p YES NO YES Display: