ctcRbase

Entry Detail

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General Information

Database ID: SKCM06495 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: COL21A1 Full Name: collagen type XXI alpha 1 chain Category: mRNA Synonyms: COLA1L|FP633 Chromosome: chr6 Strand: - Coordinate: Start Site(bp): 56056590 End Site(bp): 56394094 Gene Summary: This gene encodes the alpha chain of type XXI collagen, a member of the FACIT (fibril-associated collagens with interrupted helices) collagen family. Type XXI collagen is localized to tissues containing type I collagen and maintains the integrity of the extracellular matrix. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jan 2016] External Links: Ensembl ID: ENSG00000124749 HGNC ID: HGNC:17025 Entrez Gene: 81578

Expression Profile of COL21A1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-128-3p YES YES YES hsa-miR-155-5p YES YES YES hsa-miR-216b-5p YES YES NO hsa-miR-217 YES YES YES hsa-miR-224-5p YES YES NO hsa-miR-27a-3p YES YES YES hsa-miR-27b-3p YES YES YES hsa-miR-485-5p YES YES NO hsa-miR-494-3p YES YES NO Display: