ctcRbase

Entry Detail

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General Information

Database ID: SKCM06505 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: WDR6 Full Name: WD repeat domain 6 Category: mRNA Synonyms: - Chromosome: chr3 Strand: + Coordinate: Start Site(bp): 49007062 End Site(bp): 49015953 Gene Summary: This gene encodes a member of the WD repeat protein family. WD repeats are minimally conserved regions of approximately 40 amino acids typically bracketed by gly-his and trp-asp (GH-WD), which may facilitate formation of heterotrimeric or multiprotein complexes. The encoded protein interacts with serine/threonine kinase 11, and is implicated in cell growth arrest. Alternative splicing results in multiple transcript variants encoding different isoforms. [provided by RefSeq, Feb 2016] External Links: Ensembl ID: ENSG00000178252 HGNC ID: HGNC:12758 Entrez Gene: 11180

Expression Profile of WDR6 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-1-3p YES YES YES hsa-miR-193a-3p YES YES NO hsa-miR-193b-3p YES YES NO hsa-miR-206 YES YES YES hsa-miR-210-3p YES YES NO hsa-miR-214-3p YES YES NO hsa-miR-335-5p YES YES NO hsa-miR-613 YES YES YES hsa-miR-873-5p YES YES NO hsa-miR-876-5p YES YES YES hsa-miR-9-5p YES YES YES Display: