Entry Detail



General Information

Database ID:SKCM06521
Cancer Type:melanoma
Dataset:GSE38495
CTCs/CTM Isolation Method:immunomagnetic purification



Gene Information

ncRNA Symbol:RNF170
Full Name:ring finger protein 170
Category:mRNA
Synonyms:ADSA|SNAX1
Chromosome:chr8
Strand:-
Coordinate:
Start Site(bp):42849637End Site(bp):42897290
Gene Summary:This gene encodes a RING domain-containing protein that resides in the endoplasmic reticulum (ER) membrane. This protein functions as an E3 ubiquitin ligase and mediates ubiquitination and processing of inositol 1,4,5-trisphosphate (IP3) receptors via the ER-associated protein degradation pathway. It is recruited to the activated IP3 receptors by the ERLIN1/ERLIN2 complex to which it is constitutively bound. Mutations in this gene are associated with autosomal dominant sensory ataxia. Alternatively spliced transcript variants have been found for this gene. [provided by RefSeq, Jun 2012]
External Links:
Ensembl ID:ENSG00000120925
HGNC ID:HGNC:25358
Entrez Gene:81790



Expression Profile of RNF170 Gene

 







Regulatory Relationship

mRNA targets:NA
miRNA targets:
miRNA NamePITAmiRandaRNAhybrid
hsa-let-7a-5p
NO
YES
YES
hsa-let-7b-5p
NO
YES
YES
hsa-let-7c-5p
NO
YES
YES
hsa-let-7d-5p
NO
YES
YES
hsa-let-7e-5p
NO
YES
YES
hsa-let-7f-5p
NO
YES
YES
hsa-let-7g-5p
NO
YES
YES
hsa-let-7i-5p
NO
YES
YES
hsa-miR-145-5p
YES
YES
YES
hsa-miR-186-5p
NO
YES
YES
hsa-miR-200b-3p
YES
YES
NO
hsa-miR-200c-3p
YES
YES
NO
hsa-miR-370-3p
YES
YES
NO
hsa-miR-429
YES
YES
NO
hsa-miR-98-5p
NO
YES
YES
Display: