ctcRbase

Entry Detail

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General Information

Database ID: SKCM06525 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: ASB1 Full Name: ankyrin repeat and SOCS box containing 1 Category: mRNA Synonyms: ASB-1 Chromosome: chr2 Strand: + Coordinate: Start Site(bp): 238426742 End Site(bp): 238452250 Gene Summary: The protein encoded by this gene contains an ankyrin repeat sequence and SOCS box domain. The SOCS box serves to couple suppressor of cytokine signalling (SOCS) proteins and their binding partners with the elongin B and C complex, targeting them for ubiquitination and degradation. [provided by RefSeq, Aug 2016] External Links: Ensembl ID: ENSG00000065802 HGNC ID: HGNC:16011 Entrez Gene: 51665

Expression Profile of ASB1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-103a-3p YES NO NO hsa-miR-107 YES NO NO hsa-miR-124-3p YES NO YES hsa-miR-133a-3p YES NO YES hsa-miR-133b YES NO YES hsa-miR-146a-5p YES YES NO hsa-miR-146b-5p YES YES NO hsa-miR-15a-5p YES NO NO hsa-miR-15b-5p YES NO NO hsa-miR-16-5p YES NO NO hsa-miR-195-5p YES NO NO hsa-miR-205-5p YES YES NO hsa-miR-214-3p YES NO NO hsa-miR-302a-3p YES NO YES hsa-miR-302b-3p YES NO YES hsa-miR-302c-3p YES NO YES hsa-miR-302d-3p YES NO YES hsa-miR-302e YES NO YES hsa-miR-34a-5p YES YES YES hsa-miR-34c-5p YES YES YES hsa-miR-372-3p YES NO YES hsa-miR-373-3p YES NO YES hsa-miR-424-5p YES NO NO hsa-miR-449a YES YES YES hsa-miR-449b-5p YES YES YES hsa-miR-497-5p YES NO NO hsa-miR-503-5p YES NO NO hsa-miR-520a-3p YES NO YES hsa-miR-520b YES NO YES hsa-miR-520c-3p YES NO YES hsa-miR-520d-3p YES NO YES hsa-miR-520e YES NO YES hsa-miR-876-5p YES YES NO Display: