ctcRbase

Entry Detail

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General Information

Database ID: SKCM06534 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: ULK2 Full Name: unc-51 like autophagy activating kinase 2 Category: mRNA Synonyms: ATG1B|Unc51.2 Chromosome: chr17 Strand: - Coordinate: Start Site(bp): 19770829 End Site(bp): 19867936 Gene Summary: This gene encodes a protein that is similar to a serine/threonine kinase in C. elegans which is involved in axonal elongation. The structure of this protein is similar to the C. elegans protein in that both proteins have an N-terminal kinase domain, a central proline/serine rich (PS) domain, and a C-terminal (C) domain. The gene is located within the Smith-Magenis syndrome region on chromosome 17. Alternatively spliced transcript variants encoding the same protein have been identified. [provided by RefSeq, Dec 2008] External Links: Ensembl ID: ENSG00000083290 HGNC ID: HGNC:13480 Entrez Gene: 9706

Expression Profile of ULK2 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-let-7a-5p YES YES YES hsa-let-7b-5p YES YES YES hsa-let-7c-5p YES YES YES hsa-let-7d-5p YES YES YES hsa-let-7e-5p YES YES YES hsa-let-7f-5p YES YES YES hsa-let-7g-5p YES YES YES hsa-let-7i-5p YES YES YES hsa-miR-1297 YES YES YES hsa-miR-130a-3p YES YES YES hsa-miR-130b-3p YES YES YES hsa-miR-141-3p YES YES YES hsa-miR-155-5p YES NO YES hsa-miR-19a-3p YES YES NO hsa-miR-19b-3p YES YES NO hsa-miR-200a-3p YES YES YES hsa-miR-223-3p YES YES YES hsa-miR-23a-3p YES NO YES hsa-miR-23b-3p YES NO YES hsa-miR-26a-5p YES YES YES hsa-miR-26b-5p YES YES YES hsa-miR-299-5p YES NO YES hsa-miR-300 YES YES NO hsa-miR-301a-3p YES YES YES hsa-miR-301b-3p YES YES YES hsa-miR-329-3p YES NO NO hsa-miR-361-5p YES NO YES hsa-miR-362-3p YES NO NO hsa-miR-365a-3p YES NO YES hsa-miR-377-3p YES NO YES hsa-miR-381-3p YES YES NO hsa-miR-454-3p YES YES YES hsa-miR-495-3p YES YES NO hsa-miR-7-5p YES NO YES hsa-miR-9-5p YES NO YES hsa-miR-98-5p YES YES YES Display: