ctcRbase

Entry Detail

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General Information

Database ID: SKCM06542 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: HOMER2 Full Name: homer scaffold protein 2 Category: mRNA Synonyms: ACPD|CPD|DFNA68|HOMER-2|VESL-2 Chromosome: chr15 Strand: - Coordinate: Start Site(bp): 82836946 End Site(bp): 82986153 Gene Summary: This gene encodes a member of the homer family of dendritic proteins. Members of this family regulate group 1 metabotrophic glutamate receptor function. The encoded protein is a postsynaptic density scaffolding protein. Alternative splicing results in multiple transcript variants. Two related pseudogenes have been identified on chromosome 14. [provided by RefSeq, Jun 2011] External Links: Ensembl ID: ENSG00000103942 HGNC ID: HGNC:17513 Entrez Gene: 9455

Expression Profile of HOMER2 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-129-2-3p YES NO YES hsa-miR-135a-5p YES YES NO hsa-miR-135b-5p YES YES NO hsa-miR-141-3p YES YES NO hsa-miR-145-5p YES YES YES hsa-miR-186-5p YES YES NO hsa-miR-200a-3p YES YES NO hsa-miR-217 YES YES YES hsa-miR-29a-3p YES YES NO hsa-miR-29b-3p YES YES NO hsa-miR-29c-3p YES YES NO hsa-miR-379-5p YES YES YES hsa-miR-495-3p YES YES NO hsa-miR-653-5p YES YES NO hsa-miR-874-3p YES YES YES Display: