Entry Detail



General Information

Database ID:SKCM06559
Cancer Type:melanoma
Dataset:GSE38495
CTCs/CTM Isolation Method:immunomagnetic purification



Gene Information

ncRNA Symbol:TNPO3
Full Name:transportin 3
Category:mRNA
Synonyms:IPO12|LGMD1F|LGMDD2|MTR10A|TRN-SR|TRN-SR2|TRNSR
Chromosome:chr7
Strand:-
Coordinate:
Start Site(bp):128954180End Site(bp):129055173
Gene Summary:The protein encoded by this gene is a nuclear import receptor for serine/arginine-rich (SR) proteins such as the splicing factors SFRS1 and SFRS2. The encoded protein has also been shown to be involved in HIV-1 infection, apparently through interaction with the HIV-1 capsid protein. Two transcript variants encoding different isoforms as well as a noncoding transcript have been found for this gene.[provided by RefSeq, Jul 2010]
External Links:
Ensembl ID:ENSG00000064419
HGNC ID:HGNC:17103
Entrez Gene:23534



Expression Profile of TNPO3 Gene

 







Regulatory Relationship

mRNA targets:NA
miRNA targets:
miRNA NamePITAmiRandaRNAhybrid
hsa-miR-129-5p
YES
YES
NO
hsa-miR-147a
YES
NO
NO
hsa-miR-210-3p
YES
YES
NO
hsa-miR-219a-5p
YES
NO
YES
hsa-miR-27a-3p
YES
YES
YES
hsa-miR-27b-3p
YES
YES
YES
hsa-miR-339-5p
YES
YES
YES
hsa-miR-342-3p
YES
YES
YES
hsa-miR-542-3p
YES
YES
YES
hsa-miR-873-5p
YES
YES
YES
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