ctcRbase

Entry Detail

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General Information

Database ID: SKCM06564 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: RBM14-RBM4 Full Name: RBM14-RBM4 readthrough Category: mRNA Synonyms: COAZ|PSP2|RBM14|SIP Chromosome: chr11 Strand: + Coordinate: Start Site(bp): 66616626 End Site(bp): 66646469 Gene Summary: This locus represents naturally occurring read-through transcription between the neighboring RBM14 (RNA binding motif protein 14) and RBM4 (RNA binding motif protein 4) genes. Alternative splicing results in multiple transcript variants, one of which encodes a fusion protein that shares sequence identity with each individual gene product. This fusion protein contains RRM and zinc finger domains, and it functions to stimulate transcription in a hormone and receptor-dependent manner. [provided by RefSeq, Nov 2010] External Links: Ensembl ID: ENSG00000248643 HGNC ID: HGNC:38840 Entrez Gene: 100526737

Expression Profile of RBM14-RBM4 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-106a-5p YES YES NO hsa-miR-106b-5p YES YES NO hsa-miR-139-5p YES YES NO hsa-miR-146a-5p YES YES NO hsa-miR-146b-5p YES YES NO hsa-miR-17-5p YES YES NO hsa-miR-185-5p YES YES NO hsa-miR-20a-5p YES YES NO hsa-miR-20b-5p YES YES NO hsa-miR-221-3p YES YES NO hsa-miR-222-3p YES YES NO hsa-miR-370-3p YES YES NO hsa-miR-382-5p YES YES NO hsa-miR-519d-3p YES YES NO hsa-miR-650 YES NO NO hsa-miR-7-5p YES YES NO hsa-miR-873-5p YES YES NO hsa-miR-93-5p YES YES NO Display: