ctcRbase

Entry Detail

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General Information

Database ID: SKCM06607 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: TAPT1 Full Name: transmembrane anterior posterior transformation 1 Category: mRNA Synonyms: CMVFR|OCLSBG Chromosome: chr4 Strand: - Coordinate: Start Site(bp): 16160505 End Site(bp): 16227410 Gene Summary: This gene encodes a highly conserved protein that localizes to the centrosome and/or ciliary basal body. Mutations in this gene disrupt Golgi morphology and trafficking and normal primary cilium formation and these mutations are congenitally manifested by severe undermineralization of the intra-uterine skeleton. A mutation in the mouse ortholog of this gene results in homeotic, posterior-to-anterior transformations of the axial skeleton which are similar to the phenotype of mouse homeobox C8 gene mutants. In mouse, this gene is thought to function downstream of homeobox C8 to transduce extracellular patterning information during axial skeleton development. [provided by RefSeq, Jan 2017] External Links: Ensembl ID: ENSG00000169762 HGNC ID: HGNC:26887 Entrez Gene: 202018

Expression Profile of TAPT1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-101-3p YES YES NO hsa-miR-1271-5p YES NO YES hsa-miR-153-3p YES YES NO hsa-miR-155-5p YES YES YES hsa-miR-182-5p YES YES YES hsa-miR-193a-3p YES YES NO hsa-miR-193b-3p YES YES NO hsa-miR-200b-3p YES YES NO hsa-miR-200c-3p YES YES NO hsa-miR-205-5p YES YES YES hsa-miR-23a-3p YES YES NO hsa-miR-23b-3p YES YES NO hsa-miR-329-3p YES NO NO hsa-miR-340-5p YES NO YES hsa-miR-362-3p YES NO NO hsa-miR-377-3p YES YES NO hsa-miR-382-5p YES YES NO hsa-miR-429 YES YES NO hsa-miR-543 YES YES NO hsa-miR-9-5p YES YES NO hsa-miR-96-5p YES NO YES Display: