ctcRbase

Entry Detail

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General Information

Database ID: SKCM06766 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: ALX1 Full Name: ALX homeobox 1 Category: mRNA Synonyms: CART1|FND3|HEL23 Chromosome: chr12 Strand: + Coordinate: Start Site(bp): 85280107 End Site(bp): 85301784 Gene Summary: The specific function of this gene has yet to be determined in humans; however, in rodents, it is necessary for survival of the forebrain mesenchyme and may also be involved in development of the cervix. Mutations in the mouse gene lead to neural tube defects such as acrania and meroanencephaly. [provided by RefSeq, Jul 2008] External Links: Ensembl ID: ENSG00000180318 HGNC ID: HGNC:1494 Entrez Gene: 8092

Expression Profile of ALX1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-15a-5p YES YES NO hsa-miR-15b-5p YES YES NO hsa-miR-16-5p YES YES NO hsa-miR-186-5p YES YES NO hsa-miR-192-5p YES YES YES hsa-miR-195-5p YES YES NO hsa-miR-214-3p YES YES NO hsa-miR-215-5p YES YES YES hsa-miR-21-5p YES YES YES hsa-miR-296-3p YES YES NO hsa-miR-30a-5p YES YES NO hsa-miR-30b-5p YES YES NO hsa-miR-30c-5p YES YES NO hsa-miR-30d-5p YES YES NO hsa-miR-30e-5p YES YES NO hsa-miR-362-5p YES NO YES hsa-miR-409-3p YES NO YES hsa-miR-424-5p YES YES NO hsa-miR-497-5p YES YES NO hsa-miR-503-5p YES YES NO hsa-miR-590-5p YES YES YES Display: