ctcRbase

Entry Detail

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General Information

Database ID: SKCM06786 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: MAGI2 Full Name: membrane associated guanylate kinase, WW and PDZ domain containing 2 Category: mRNA Synonyms: ACVRIP1|AIP-1|AIP1|ARIP1|MAGI-2|NPHS15|SSCAM Chromosome: chr7 Strand: - Coordinate: Start Site(bp): 78017057 End Site(bp): 79453574 Gene Summary: The protein encoded by this gene interacts with atrophin-1. Atrophin-1 contains a polyglutamine repeat, expansion of which is responsible for dentatorubral and pallidoluysian atrophy. This encoded protein is characterized by two WW domains, a guanylate kinase-like domain, and multiple PDZ domains. It has structural similarity to the membrane-associated guanylate kinase homologue (MAGUK) family. [provided by RefSeq, Jul 2008] External Links: Ensembl ID: ENSG00000187391 HGNC ID: HGNC:18957 Entrez Gene: 9863

Expression Profile of MAGI2 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-101-3p YES YES YES hsa-miR-106a-5p YES YES NO hsa-miR-106b-5p YES YES NO hsa-miR-129-5p YES YES NO hsa-miR-130a-3p YES YES NO hsa-miR-130b-3p YES YES NO hsa-miR-134-5p YES YES NO hsa-miR-140-5p YES YES YES hsa-miR-142-5p YES NO YES hsa-miR-144-3p YES YES YES hsa-miR-145-5p YES YES YES hsa-miR-17-5p YES YES NO hsa-miR-186-5p YES YES NO hsa-miR-190a-5p YES YES YES hsa-miR-190b YES YES YES hsa-miR-19a-3p YES YES NO hsa-miR-19b-3p YES YES NO hsa-miR-205-5p YES YES YES hsa-miR-20a-5p YES YES NO hsa-miR-20b-5p YES YES NO hsa-miR-219a-5p YES YES NO hsa-miR-23a-3p YES YES NO hsa-miR-23b-3p YES YES NO hsa-miR-301a-3p YES YES NO hsa-miR-301b-3p YES YES NO hsa-miR-30a-5p YES YES YES hsa-miR-30b-5p YES YES YES hsa-miR-30c-5p YES YES YES hsa-miR-30d-5p YES YES YES hsa-miR-30e-5p YES YES YES hsa-miR-339-5p YES YES NO hsa-miR-340-5p YES YES NO hsa-miR-454-3p YES YES NO hsa-miR-487a-3p YES NO YES hsa-miR-491-5p YES YES NO hsa-miR-519d-3p YES YES NO hsa-miR-655-3p YES NO YES hsa-miR-93-5p YES YES NO Display: