ctcRbase

Entry Detail

---



General Information

Database ID: SKCM06870 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: DNAJC5 Full Name: DnaJ heat shock protein family (Hsp40) member C5 Category: mRNA Synonyms: CLN4|CLN4B|CSP|DNAJC5A|NCL|mir-941-2|mir-941-3|mir-941-4|mir-941-5 Chromosome: chr20 Strand: + Coordinate: Start Site(bp): 63895182 End Site(bp): 63936031 Gene Summary: This gene is a member of the J protein family. J proteins function in many cellular processes by regulating the ATPase activity of 70 kDa heat shock proteins. The encoded protein plays a role in membrane trafficking and protein folding, and has been shown to have anti-neurodegenerative properties. The encoded protein is known to play a role in cystic fibrosis and Huntington's disease. A pseudogene of this gene is located on the short arm of chromosome 8. [provided by RefSeq, Nov 2010] External Links: Ensembl ID: ENSG00000101152 HGNC ID: HGNC:16235 Entrez Gene: 80331

Expression Profile of DNAJC5 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-122-5p YES YES NO hsa-miR-128-3p YES YES NO hsa-miR-139-5p YES YES YES hsa-miR-1-3p YES NO YES hsa-miR-148a-3p YES YES NO hsa-miR-148b-3p YES YES NO hsa-miR-152-3p YES YES NO hsa-miR-200b-3p YES YES YES hsa-miR-200c-3p YES YES YES hsa-miR-206 YES NO YES hsa-miR-217 YES YES YES hsa-miR-221-3p YES YES NO hsa-miR-222-3p YES YES NO hsa-miR-27a-3p YES YES NO hsa-miR-27b-3p YES YES NO hsa-miR-429 YES YES YES hsa-miR-433-3p YES YES YES hsa-miR-448 YES YES NO hsa-miR-454-3p YES YES NO hsa-miR-582-5p YES NO YES hsa-miR-613 YES NO YES hsa-miR-873-5p YES YES NO Display: