ctcRbase

Entry Detail

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General Information

Database ID: SKCM06950 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: NET1 Full Name: neuroepithelial cell transforming 1 Category: mRNA Synonyms: ARHGEF8|NET1A Chromosome: chr10 Strand: + Coordinate: Start Site(bp): 5412551 End Site(bp): 5458463 Gene Summary: This gene is part of the family of Rho guanine nucleotide exchange factors. Members of this family activate Rho proteins by catalyzing the exchange of GDP for GTP. The protein encoded by this gene interacts with RhoA within the cell nucleus and may play a role in repairing DNA damage after ionizing radiation. Pseudogenes of this gene are located on the long arms of chromosomes 1, 7 and 18. Alternative splicing results in multiple transcript variants that encode different protein isoforms. [provided by RefSeq, Jul 2012] External Links: Ensembl ID: ENSG00000173848 HGNC ID: HGNC:14592 Entrez Gene: 10276

Expression Profile of NET1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-10a-5p YES YES NO hsa-miR-10b-5p YES YES NO hsa-miR-124-3p YES YES NO hsa-miR-132-3p YES YES NO hsa-miR-135a-5p YES YES YES hsa-miR-135b-5p YES YES YES hsa-miR-1-3p YES YES YES hsa-miR-140-5p YES YES NO hsa-miR-141-3p YES YES NO hsa-miR-144-3p YES YES YES hsa-miR-145-5p YES YES YES hsa-miR-147a YES NO NO hsa-miR-150-5p YES YES NO hsa-miR-183-5p YES YES NO hsa-miR-186-5p YES YES NO hsa-miR-193a-3p YES YES NO hsa-miR-193b-3p YES YES NO hsa-miR-197-3p YES YES NO hsa-miR-199a-3p YES NO YES hsa-miR-199b-3p YES NO YES hsa-miR-200a-3p YES YES NO hsa-miR-206 YES YES YES hsa-miR-212-3p YES YES NO hsa-miR-218-5p YES YES NO hsa-miR-221-3p YES YES NO hsa-miR-222-3p YES YES NO hsa-miR-22-3p YES YES YES hsa-miR-24-3p YES YES YES hsa-miR-27a-3p YES YES NO hsa-miR-27b-3p YES YES NO hsa-miR-329-3p YES NO NO hsa-miR-338-3p YES YES NO hsa-miR-340-5p YES YES NO hsa-miR-362-3p YES NO YES hsa-miR-494-3p YES YES NO hsa-miR-495-3p YES YES NO hsa-miR-505-3p YES YES NO hsa-miR-613 YES YES YES hsa-miR-7-5p YES YES NO hsa-miR-873-5p YES YES NO Display: