Entry Detail



General Information

Database ID:SKCM06980
Cancer Type:melanoma
Dataset:GSE38495
CTCs/CTM Isolation Method:immunomagnetic purification



Gene Information

ncRNA Symbol:PBX1
Full Name:PBX homeobox 1
Category:mRNA
Synonyms:CAKUHED
Chromosome:chr1
Strand:+
Coordinate:
Start Site(bp):164555584End Site(bp):164899296
Gene Summary:This gene encodes a nuclear protein that belongs to the PBX homeobox family of transcriptional factors. Studies in mice suggest that this gene may be involved in the regulation of osteogenesis and required for skeletal patterning and programming. A chromosomal translocation, t(1;19) involving this gene and TCF3/E2A gene, is associated with pre-B-cell acute lymphoblastic leukemia. The resulting fusion protein, in which the DNA binding domain of E2A is replaced by the DNA binding domain of this protein, transforms cells by constitutively activating transcription of genes regulated by the PBX protein family. Alternatively spliced transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jun 2017]
External Links:
Ensembl ID:ENSG00000185630
HGNC ID:HGNC:8632
Entrez Gene:5087



Expression Profile of PBX1 Gene

 







Regulatory Relationship

mRNA targets:NA
miRNA targets:
miRNA NamePITAmiRandaRNAhybrid
hsa-let-7a-5p
NO
YES
YES
hsa-let-7b-5p
NO
YES
YES
hsa-let-7c-5p
NO
YES
YES
hsa-let-7d-5p
NO
YES
YES
hsa-let-7e-5p
NO
YES
YES
hsa-let-7f-5p
NO
YES
YES
hsa-let-7g-5p
NO
YES
YES
hsa-let-7i-5p
NO
YES
YES
hsa-miR-142-5p
YES
NO
YES
hsa-miR-181a-5p
NO
YES
YES
hsa-miR-181b-5p
NO
YES
YES
hsa-miR-181c-5p
NO
YES
YES
hsa-miR-181d-5p
NO
YES
YES
hsa-miR-185-5p
YES
NO
YES
hsa-miR-186-5p
NO
YES
YES
hsa-miR-196a-5p
NO
YES
YES
hsa-miR-196b-5p
NO
YES
YES
hsa-miR-300
NO
YES
YES
hsa-miR-320a
NO
YES
YES
hsa-miR-320b
NO
YES
YES
hsa-miR-320c
NO
YES
YES
hsa-miR-320d
NO
YES
YES
hsa-miR-324-3p
YES
NO
NO
hsa-miR-324-5p
YES
YES
YES
hsa-miR-340-5p
YES
YES
YES
hsa-miR-381-3p
NO
YES
YES
hsa-miR-496
NO
YES
YES
hsa-miR-543
NO
YES
YES
hsa-miR-653-5p
YES
YES
NO
hsa-miR-98-5p
NO
YES
YES
Display: