ctcRbase

Entry Detail

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General Information

Database ID: SKCM07002 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: TGFBR3 Full Name: transforming growth factor beta receptor 3 Category: mRNA Synonyms: BGCAN|betaglycan Chromosome: chr1 Strand: - Coordinate: Start Site(bp): 91680343 End Site(bp): 91906335 Gene Summary: This locus encodes the transforming growth factor (TGF)-beta type III receptor. The encoded receptor is a membrane proteoglycan that often functions as a co-receptor with other TGF-beta receptor superfamily members. Ectodomain shedding produces soluble TGFBR3, which may inhibit TGFB signaling. Decreased expression of this receptor has been observed in various cancers. Alternatively spliced transcript variants encoding different isoforms have been identified for this gene.[provided by RefSeq, Sep 2010] External Links: Ensembl ID: ENSG00000069702 HGNC ID: HGNC:11774 Entrez Gene: 7049

Expression Profile of TGFBR3 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-let-7a-5p NO YES YES hsa-let-7b-5p NO YES YES hsa-let-7c-5p NO YES YES hsa-let-7d-5p NO YES YES hsa-let-7e-5p NO YES YES hsa-let-7f-5p NO YES YES hsa-let-7g-5p NO YES YES hsa-let-7i-5p NO YES YES hsa-miR-101-3p NO YES YES hsa-miR-103a-3p YES YES YES hsa-miR-107 YES YES YES hsa-miR-139-5p YES YES NO hsa-miR-1-3p YES YES YES hsa-miR-15a-5p YES YES YES hsa-miR-15b-5p YES YES YES hsa-miR-16-5p YES YES YES hsa-miR-186-5p YES YES NO hsa-miR-18a-5p YES YES NO hsa-miR-18b-5p YES YES NO hsa-miR-193a-3p NO YES YES hsa-miR-193b-3p NO YES YES hsa-miR-195-5p YES YES YES hsa-miR-196a-5p NO YES YES hsa-miR-196b-5p NO YES YES hsa-miR-19a-3p YES YES NO hsa-miR-19b-3p YES YES NO hsa-miR-206 YES YES YES hsa-miR-21-5p YES YES NO hsa-miR-223-3p NO YES YES hsa-miR-23a-3p YES YES YES hsa-miR-23b-3p YES YES YES hsa-miR-27a-3p NO YES YES hsa-miR-27b-3p NO YES YES hsa-miR-31-5p YES YES NO hsa-miR-330-3p YES NO YES hsa-miR-340-5p YES YES NO hsa-miR-376c-3p NO YES YES hsa-miR-409-3p YES NO YES hsa-miR-423-5p YES NO YES hsa-miR-424-5p YES YES YES hsa-miR-455-5p YES YES NO hsa-miR-488-3p YES YES NO hsa-miR-497-5p YES YES YES hsa-miR-590-5p YES YES NO hsa-miR-613 YES YES YES hsa-miR-98-5p NO YES YES Display: