ctcRbase

Entry Detail

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General Information

Database ID: SKCM07032 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: GALNT10 Full Name: polypeptide N-acetylgalactosaminyltransferase 10 Category: mRNA Synonyms: GALNACT10|PPGALNACT10|PPGANTASE10 Chromosome: chr5 Strand: + Coordinate: Start Site(bp): 154190730 End Site(bp): 154420984 Gene Summary: This gene encodes a member of the GalNAc polypeptide N-acetylgalactosaminyltransferases. These enzymes catalyze the first step in the synthesis of mucin-type oligosaccharides. These proteins transfer GalNAc from UDP-GalNAc to either serine or threonine residues of polypeptide acceptors. The protein encoded by this locus may have increased catalytic activity toward glycosylated peptides compared to activity toward non-glycosylated peptides.[provided by RefSeq, Apr 2010] External Links: Ensembl ID: ENSG00000164574 HGNC ID: HGNC:19873 Entrez Gene: 55568

Expression Profile of GALNT10 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-122-5p YES YES NO hsa-miR-124-3p YES YES YES hsa-miR-1297 YES NO YES hsa-miR-138-5p YES YES NO hsa-miR-1-3p YES YES NO hsa-miR-149-5p YES NO NO hsa-miR-206 YES YES NO hsa-miR-216a-5p YES YES NO hsa-miR-26a-5p YES NO YES hsa-miR-26b-5p YES NO YES hsa-miR-29a-3p YES YES NO hsa-miR-29b-3p YES YES NO hsa-miR-29c-3p YES YES NO hsa-miR-329-3p YES NO NO hsa-miR-33a-5p YES YES YES hsa-miR-33b-5p YES YES YES hsa-miR-362-3p YES NO NO hsa-miR-370-3p YES YES NO hsa-miR-425-5p YES YES NO hsa-miR-505-3p YES YES NO hsa-miR-506-3p YES YES NO hsa-miR-542-3p YES YES NO hsa-miR-613 YES YES NO hsa-miR-642a-5p YES NO NO hsa-miR-760 YES NO YES hsa-miR-874-3p YES YES NO hsa-miR-876-5p YES YES NO Display: