ctcRbase

Entry Detail

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General Information

Database ID: SKCM07036 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: PDCD11 Full Name: programmed cell death 11 Category: mRNA Synonyms: ALG-4|ALG4|NFBP|RRP5 Chromosome: chr10 Strand: + Coordinate: Start Site(bp): 103396648 End Site(bp): 103446292 Gene Summary: PDCD11 is a NF-kappa-B (NFKB1; 164011)-binding protein that colocalizes with U3 RNA (MIM 180710) in the nucleolus and is required for rRNA maturation and generation of 18S rRNA (Sweet et al., 2003 [PubMed 14624448]; Sweet et al., 2008 [PubMed 17654514]).[supplied by OMIM, Oct 2008] External Links: Ensembl ID: ENSG00000148843 HGNC ID: HGNC:13408 Entrez Gene: 22984

Expression Profile of PDCD11 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-103a-3p YES YES NO hsa-miR-107 YES YES NO hsa-miR-136-5p YES YES NO hsa-miR-15a-5p YES YES YES hsa-miR-15b-5p YES YES YES hsa-miR-16-5p YES YES YES hsa-miR-194-5p YES YES NO hsa-miR-195-5p YES YES YES hsa-miR-216a-5p YES YES NO hsa-miR-326 YES YES NO hsa-miR-330-5p YES YES NO hsa-miR-424-5p YES YES YES hsa-miR-485-5p YES YES NO hsa-miR-497-5p YES YES YES hsa-miR-876-5p YES YES NO Display: