ctcRbase

Entry Detail

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General Information

Database ID: SKCM07042 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: TNIP1 Full Name: TNFAIP3 interacting protein 1 Category: mRNA Synonyms: ABIN-1|NAF1|VAN|nip40-1 Chromosome: chr5 Strand: - Coordinate: Start Site(bp): 151029945 End Site(bp): 151093577 Gene Summary: This gene encodes an A20-binding protein which plays a role in autoimmunity and tissue homeostasis through the regulation of nuclear factor kappa-B activation. Mutations in this gene have been associated with psoriatic arthritis, rheumatoid arthritis, and systemic lupus erythematosus. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Nov 2011] External Links: Ensembl ID: ENSG00000145901 HGNC ID: HGNC:16903 Entrez Gene: 10318

Expression Profile of TNIP1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-135a-5p YES YES NO hsa-miR-135b-5p YES YES NO hsa-miR-149-5p YES YES NO hsa-miR-15a-5p YES YES NO hsa-miR-15b-5p YES YES NO hsa-miR-16-5p YES YES NO hsa-miR-182-5p YES YES NO hsa-miR-195-5p YES YES NO hsa-miR-19a-3p YES YES YES hsa-miR-19b-3p YES YES YES hsa-miR-214-3p YES YES NO hsa-miR-30a-5p YES YES YES hsa-miR-30b-5p YES YES YES hsa-miR-30c-5p YES YES YES hsa-miR-30d-5p YES YES YES hsa-miR-30e-5p YES YES YES hsa-miR-424-5p YES YES NO hsa-miR-497-5p YES YES NO hsa-miR-760 YES NO YES hsa-miR-876-5p YES NO YES Display: