ctcRbase

Entry Detail

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General Information

Database ID: SKCM07062 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: PCF11 Full Name: PCF11, cleavage and polyadenylation factor subunit Category: mRNA Synonyms: - Chromosome: chr11 Strand: + Coordinate: Start Site(bp): 83156988 End Site(bp): 83187451 Gene Summary: The protein encoded by this gene binds to CLP1 to form pre-mRNA cleavage factor IIm. The encoded protein is necessary for efficient Pol II transcription termination and may be involved in degradation of the 3' product of polyA site cleavage. [provided by RefSeq, Oct 2016] External Links: Ensembl ID: ENSG00000165494 HGNC ID: HGNC:30097 Entrez Gene: 51585

Expression Profile of PCF11 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-128-3p YES YES NO hsa-miR-136-5p YES YES NO hsa-miR-139-5p YES YES YES hsa-miR-149-5p YES YES YES hsa-miR-153-3p YES YES NO hsa-miR-190a-5p YES YES NO hsa-miR-190b YES YES NO hsa-miR-200b-3p YES YES NO hsa-miR-200c-3p YES YES NO hsa-miR-214-3p YES YES NO hsa-miR-224-5p YES YES NO hsa-miR-300 YES YES NO hsa-miR-374a-5p YES YES YES hsa-miR-374b-5p YES YES YES hsa-miR-377-3p YES YES YES hsa-miR-381-3p YES YES NO hsa-miR-429 YES YES NO hsa-miR-448 YES YES NO hsa-miR-487b-3p YES YES YES hsa-miR-503-5p YES YES NO hsa-miR-582-5p YES NO YES hsa-miR-599 YES YES NO Display: