Entry Detail



General Information

Database ID:SKCM07229
Cancer Type:melanoma
Dataset:GSE38495
CTCs/CTM Isolation Method:immunomagnetic purification



Gene Information

ncRNA Symbol:TAF6
Full Name:TATA-box binding protein associated factor 6
Category:mRNA
Synonyms:ALYUS|MGC:8964|TAF(II)70|TAF(II)80|TAF2E|TAFII-70|TAFII-80|TAFII70|TAFII80|TAFII85
Chromosome:chr7
Strand:-
Coordinate:
Start Site(bp):100107070End Site(bp):100119841
Gene Summary:Initiation of transcription by RNA polymerase II requires the activities of more than 70 polypeptides. The protein that coordinates these activities is transcription factor IID (TFIID), which binds to the core promoter to position the polymerase properly, serves as the scaffold for assembly of the remainder of the transcription complex, and acts as a channel for regulatory signals. TFIID is composed of the TATA-binding protein (TBP) and a group of evolutionarily conserved proteins known as TBP-associated factors or TAFs. TAFs may participate in basal transcription, serve as coactivators, function in promoter recognition or modify general transcription factors (GTFs) to facilitate complex assembly and transcription initiation. This gene encodes one of the smaller subunits of TFIID that binds weakly to TBP but strongly to TAF1, the largest subunit of TFIID. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jun 2010]
External Links:
Ensembl ID:ENSG00000106290
HGNC ID:HGNC:11540
Entrez Gene:6878



Expression Profile of TAF6 Gene

 







Regulatory Relationship

mRNA targets:NA
miRNA targets:
miRNA NamePITAmiRandaRNAhybrid
hsa-miR-106b-5p
YES
YES
NO
hsa-miR-149-5p
YES
YES
NO
hsa-miR-193a-3p
YES
YES
NO
hsa-miR-193b-3p
YES
YES
NO
Display: