Entry Detail



General Information

Database ID:SKCM07266
Cancer Type:melanoma
Dataset:GSE38495
CTCs/CTM Isolation Method:immunomagnetic purification



Gene Information

ncRNA Symbol:NLRP2
Full Name:NLR family pyrin domain containing 2
Category:mRNA
Synonyms:CLR19.9|NALP2|NBS1|PAN1|PYPAF2
Chromosome:chr19
Strand:+
Coordinate:
Start Site(bp):54953130End Site(bp):55001142
Gene Summary:This gene is a member of the nucleotide-binding and leucine-rich repeat receptor (NLR) family, and is predicted to contain an N-terminal pyrin effector domain (PYD), a centrally-located nucleotide-binding and oligomerization domain (NACHT) and C-terminal leucine-rich repeats (LRR). Members of this gene family are thought to be important regulators of immune responses. This gene product interacts with components of the IkB kinase (IKK) complex, and can regulate both caspase-1 and NF-kB (nuclear factor kappa-light-chain-enhancer of activated B cells) activity. The pyrin domain is necessary and sufficient for suppression of NF-kB activity. An allelic variant (rs147585490) has been found that is incapable of blocking the transcriptional activity of NF-kB. Alternative splicing results in multiple transcript variants encoding different isoforms. [provided by RefSeq, Dec 2016]
External Links:
Ensembl ID:ENSG00000022556
HGNC ID:HGNC:22948
Entrez Gene:55655



Expression Profile of NLRP2 Gene

 







Regulatory Relationship

mRNA targets:NA
miRNA targets:
miRNA NamePITAmiRandaRNAhybrid
hsa-miR-125a-5p
YES
YES
NO
hsa-miR-125b-5p
YES
YES
NO
hsa-miR-194-5p
YES
YES
NO
hsa-miR-495-3p
YES
YES
NO
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