ctcRbase

Entry Detail

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General Information

Database ID: SKCM07489 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: SNAP29 Full Name: synaptosome associated protein 29 Category: mRNA Synonyms: CEDNIK|SNAP-29 Chromosome: chr22 Strand: + Coordinate: Start Site(bp): 20858983 End Site(bp): 20891218 Gene Summary: This gene, a member of the SNAP25 gene family, encodes a protein involved in multiple membrane trafficking steps. Two other members of this gene family, SNAP23 and SNAP25, encode proteins that bind a syntaxin protein and mediate synaptic vesicle membrane docking and fusion to the plasma membrane. The protein encoded by this gene binds tightly to multiple syntaxins and is localized to intracellular membrane structures rather than to the plasma membrane. While the protein is mostly membrane-bound, a significant fraction of it is found free in the cytoplasm. Use of multiple polyadenylation sites has been noted for this gene. [provided by RefSeq, Jul 2008] External Links: Ensembl ID: ENSG00000099940 HGNC ID: HGNC:11133 Entrez Gene: 9342

Expression Profile of SNAP29 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-124-3p YES YES YES hsa-miR-125a-5p YES NO YES hsa-miR-125b-5p YES NO YES hsa-miR-183-5p YES YES NO hsa-miR-192-5p YES YES NO hsa-miR-215-5p YES YES NO hsa-miR-221-3p YES YES YES hsa-miR-222-3p YES YES YES hsa-miR-299-3p YES YES NO hsa-miR-338-3p YES YES YES hsa-miR-34a-5p YES YES YES hsa-miR-34c-5p YES YES YES hsa-miR-374b-5p YES YES NO hsa-miR-449a YES YES YES hsa-miR-449b-5p YES YES YES hsa-miR-488-3p YES YES NO hsa-miR-506-3p YES YES NO Display: