ctcRbase

Entry Detail

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General Information

Database ID: SKCM07593 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: GALNT12 Full Name: polypeptide N-acetylgalactosaminyltransferase 12 Category: mRNA Synonyms: CRCS1|GalNAc-T12 Chromosome: chr9 Strand: + Coordinate: Start Site(bp): 98807699 End Site(bp): 98850081 Gene Summary: This gene encodes a member of a family of UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferases, which catalyze the transfer of N-acetylgalactosamine (GalNAc) from UDP-GalNAc to a serine or threonine residue on a polypeptide acceptor in the initial step of O-linked protein glycosylation. Mutations in this gene are associated with an increased susceptibility to colorectal cancer.[provided by RefSeq, Mar 2011] External Links: Ensembl ID: ENSG00000119514 HGNC ID: HGNC:19877 Entrez Gene: 79695

Expression Profile of GALNT12 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-124-3p YES YES YES hsa-miR-129-5p YES YES NO hsa-miR-21-5p YES YES NO hsa-miR-23a-3p YES YES YES hsa-miR-23b-3p YES YES YES hsa-miR-320a YES YES NO hsa-miR-320b YES YES NO hsa-miR-320c YES YES NO hsa-miR-320d YES YES NO hsa-miR-371a-5p YES YES NO hsa-miR-506-3p YES YES NO hsa-miR-543 YES YES NO hsa-miR-590-5p YES YES NO Display: