ctcRbase

Entry Detail

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General Information

Database ID: SKCM07598 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: KIRREL1 Full Name: kirre like nephrin family adhesion molecule 1 Category: mRNA Synonyms: KIRREL|NEPH1 Chromosome: chr1 Strand: + Coordinate: Start Site(bp): 157993273 End Site(bp): 158100262 Gene Summary: NEPH1 is a member of the nephrin-like protein family, which includes NEPH2 (MIM 607761) and NEPH3 (MIM 607762). The cytoplasmic domains of these proteins interact with the C terminus of podocin (NPHS2; MIM 604766), and the genes are expressed in kidney podocytes, cells involved in ensuring size- and charge-selective ultrafiltration (Sellin et al., 2003 [PubMed 12424224]).[supplied by OMIM, Mar 2008] External Links: Ensembl ID: ENSG00000183853 HGNC ID: HGNC:15734 Entrez Gene: 55243

Expression Profile of KIRREL1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-134-5p YES YES NO hsa-miR-29a-3p YES YES YES hsa-miR-29b-3p YES YES YES hsa-miR-29c-3p YES YES YES hsa-miR-31-5p YES YES NO hsa-miR-365a-3p YES YES YES hsa-miR-383-5p YES YES NO hsa-miR-665 YES NO YES Display: