Entry Detail



General Information

Database ID:SKCM07681
Cancer Type:melanoma
Dataset:GSE38495
CTCs/CTM Isolation Method:immunomagnetic purification



Gene Information

ncRNA Symbol:CAPN1
Full Name:calpain 1
Category:mRNA
Synonyms:CANP|CANP1|CANPL1|SPG76|muCANP|muCL
Chromosome:chr11
Strand:+
Coordinate:
Start Site(bp):65180566End Site(bp):65212006
Gene Summary:The calpains, calcium-activated neutral proteases, are nonlysosomal, intracellular cysteine proteases. The mammalian calpains include ubiquitous, stomach-specific, and muscle-specific proteins. The ubiquitous enzymes consist of heterodimers with distinct large, catalytic subunits associated with a common small, regulatory subunit. This gene encodes the large subunit of the ubiquitous enzyme, calpain 1. Several transcript variants encoding two different isoforms have been found for this gene. [provided by RefSeq, Nov 2010]
External Links:
Ensembl ID:ENSG00000014216
HGNC ID:HGNC:1476
Entrez Gene:823



Expression Profile of CAPN1 Gene

 







Regulatory Relationship

mRNA targets:NA
miRNA targets:
miRNA NamePITAmiRandaRNAhybrid
hsa-miR-124-3p
YES
YES
YES
hsa-miR-140-5p
YES
YES
YES
hsa-miR-22-3p
YES
YES
YES
hsa-miR-299-3p
YES
YES
NO
hsa-miR-491-5p
YES
YES
NO
hsa-miR-506-3p
YES
YES
NO
hsa-miR-873-5p
YES
YES
NO
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