ctcRbase

Entry Detail

---



General Information

Database ID: SKCM07689 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: SETDB1 Full Name: SET domain bifurcated 1 Category: mRNA Synonyms: ESET|H3-K9-HMTase4|KG1T|KMT1E|TDRD21 Chromosome: chr1 Strand: + Coordinate: Start Site(bp): 150926263 End Site(bp): 150964744 Gene Summary: This gene encodes a histone methyltransferase which regulates histone methylation, gene silencing, and transcriptional repression. This gene has been identified as a target for treatment in Huntington Disease, given that gene silencing and transcription dysfunction likely play a role in the disease pathogenesis. Alternatively spliced transcript variants of this gene have been described.[provided by RefSeq, Jun 2011] External Links: Ensembl ID: ENSG00000143379 HGNC ID: HGNC:10761 Entrez Gene: 9869

Expression Profile of SETDB1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-136-5p YES YES NO hsa-miR-28-5p YES YES NO hsa-miR-296-3p YES YES NO hsa-miR-29a-3p YES YES YES hsa-miR-29b-3p YES YES YES hsa-miR-29c-3p YES YES YES hsa-miR-300 YES YES NO hsa-miR-381-3p YES YES NO hsa-miR-708-5p YES YES NO hsa-miR-7-5p YES YES NO hsa-miR-873-5p YES YES NO Display: