ctcRbase

Entry Detail

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General Information

Database ID: SKCM07772 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: CEBPB Full Name: CCAAT enhancer binding protein beta Category: mRNA Synonyms: C/EBP-beta|IL6DBP|NF-IL6|TCF5 Chromosome: chr20 Strand: + Coordinate: Start Site(bp): 50190734 End Site(bp): 50192689 Gene Summary: This intronless gene encodes a transcription factor that contains a basic leucine zipper (bZIP) domain. The encoded protein functions as a homodimer but can also form heterodimers with CCAAT/enhancer-binding proteins alpha, delta, and gamma. Activity of this protein is important in the regulation of genes involved in immune and inflammatory responses, among other processes. The use of alternative in-frame AUG start codons results in multiple protein isoforms, each with distinct biological functions. [provided by RefSeq, Oct 2013] External Links: Ensembl ID: ENSG00000172216 HGNC ID: HGNC:1834 Entrez Gene: 1051

Expression Profile of CEBPB Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-106a-5p YES YES NO hsa-miR-106b-5p YES YES NO hsa-miR-1323 YES NO NO hsa-miR-155-5p YES YES YES hsa-miR-17-5p YES YES NO hsa-miR-191-5p YES YES NO hsa-miR-20a-5p YES YES NO hsa-miR-20b-5p YES YES NO hsa-miR-300 YES YES NO hsa-miR-369-3p YES NO YES hsa-miR-371a-5p YES YES NO hsa-miR-374a-5p YES YES YES hsa-miR-374b-5p YES YES YES hsa-miR-376a-3p YES YES YES hsa-miR-376b-3p YES YES YES hsa-miR-376c-3p YES YES NO hsa-miR-381-3p YES YES NO hsa-miR-410-3p YES YES NO hsa-miR-421 YES YES NO hsa-miR-495-3p YES YES NO hsa-miR-519d-3p YES YES NO hsa-miR-548o-3p YES NO NO hsa-miR-655-3p YES NO YES hsa-miR-93-5p YES YES NO Display: