ctcRbase

Entry Detail

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General Information

Database ID: SKCM07820 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: AP2A1 Full Name: adaptor related protein complex 2 subunit alpha 1 Category: mRNA Synonyms: ADTAA|AP2-ALPHA|CLAPA1 Chromosome: chr19 Strand: + Coordinate: Start Site(bp): 49766968 End Site(bp): 49807113 Gene Summary: This gene encodes the alpha 1 adaptin subunit of the adaptor protein 2 (AP-2) complex found in clathrin coated vesicles. The AP-2 complex is a heterotetramer consisting of two large adaptins (alpha or beta), a medium adaptin (mu), and a small adaptin (sigma). The complex is part of the protein coat on the cytoplasmic face of coated vesicles which links clathrin to receptors in vesicles. Alternative splicing of this gene results in two transcript variants encoding two different isoforms. A third transcript variant has been described, but its full length nature has not been determined. [provided by RefSeq, Jul 2008] External Links: Ensembl ID: ENSG00000196961 HGNC ID: HGNC:561 Entrez Gene: 160

Expression Profile of AP2A1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-103a-3p YES YES NO hsa-miR-107 YES YES NO hsa-miR-1321 YES NO NO hsa-miR-15a-5p YES YES YES hsa-miR-15b-5p YES YES YES hsa-miR-16-5p YES YES YES hsa-miR-195-5p YES YES YES hsa-miR-214-3p YES YES NO hsa-miR-218-5p YES NO YES hsa-miR-30a-5p YES YES YES hsa-miR-30b-5p YES YES YES hsa-miR-30c-5p YES YES YES hsa-miR-30d-5p YES YES YES hsa-miR-30e-5p YES YES YES hsa-miR-324-5p YES YES NO hsa-miR-331-3p YES NO YES hsa-miR-342-3p YES YES NO hsa-miR-369-3p YES NO YES hsa-miR-424-5p YES YES YES hsa-miR-495-3p YES YES NO hsa-miR-497-5p YES YES YES hsa-miR-503-5p YES YES NO hsa-miR-655-3p YES NO YES Display: