ctcRbase

Entry Detail

---



General Information

Database ID: SKCM07907 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: SEPSECS Full Name: Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase Category: mRNA Synonyms: LP|PCH2D|SLA|SLA/LP Chromosome: chr4 Strand: - Coordinate: Start Site(bp): 25120014 End Site(bp): 25160442 Gene Summary: The amino acid selenocysteine is the only amino acid that does not have its own tRNA synthetase. Instead, this amino acid is synthesized on its cognate tRNA in a three step process. The protein encoded by this gene catalyzes the third step in the process, the conversion of O-phosphoseryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec).[provided by RefSeq, Mar 2011] External Links: Ensembl ID: ENSG00000109618 HGNC ID: HGNC:30605 Entrez Gene: 51091

Expression Profile of SEPSECS Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-124-3p NO YES YES hsa-miR-150-5p YES YES NO hsa-miR-216a-5p YES YES NO hsa-miR-29a-3p YES YES NO hsa-miR-29b-3p YES YES NO hsa-miR-29c-3p YES YES NO hsa-miR-30a-5p YES YES NO hsa-miR-30b-5p YES YES NO hsa-miR-30c-5p YES YES NO hsa-miR-30d-5p YES YES NO hsa-miR-30e-5p YES YES NO hsa-miR-495-3p YES YES NO Display: