Entry Detail



General Information

Database ID:SKCM07917
Cancer Type:melanoma
Dataset:GSE38495
CTCs/CTM Isolation Method:immunomagnetic purification



Gene Information

ncRNA Symbol:HOPX
Full Name:HOP homeobox
Category:mRNA
Synonyms:CAMEO|HOD|HOP|LAGY|NECC1|OB1|SMAP31|TOTO
Chromosome:chr4
Strand:-
Coordinate:
Start Site(bp):56647988End Site(bp):56681899
Gene Summary:The protein encoded by this gene is a homeodomain protein that lacks certain conserved residues required for DNA binding. It was reported that choriocarcinoma cell lines and tissues failed to express this gene, which suggested the possible involvement of this gene in malignant conversion of placental trophoblasts. Studies in mice suggest that this protein may interact with serum response factor (SRF) and modulate SRF-dependent cardiac-specific gene expression and cardiac development. Multiple alternatively spliced transcript variants have been identified for this gene. [provided by RefSeq, Feb 2009]
External Links:
Ensembl ID:ENSG00000171476
HGNC ID:HGNC:24961
Entrez Gene:84525



Expression Profile of HOPX Gene

 







Regulatory Relationship

mRNA targets:NA
miRNA targets:
miRNA NamePITAmiRandaRNAhybrid
hsa-miR-129-5p
YES
YES
NO
hsa-miR-33a-5p
YES
YES
NO
hsa-miR-33b-5p
YES
YES
NO
hsa-miR-9-5p
YES
YES
NO
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