ctcRbase

Entry Detail

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General Information

Database ID: SKCM07965 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: FBXL20 Full Name: F-box and leucine rich repeat protein 20 Category: mRNA Synonyms: Fbl2|Fbl20 Chromosome: chr17 Strand: - Coordinate: Start Site(bp): 39252644 End Site(bp): 39402523 Gene Summary: Members of the F-box protein family, such as FBXL20, are characterized by an approximately 40-amino acid F-box motif. SCF complexes, formed by SKP1 (MIM 601434), cullin (see CUL1; MIM 603134), and F-box proteins, act as protein-ubiquitin ligases. F-box proteins interact with SKP1 through the F box, and they interact with ubiquitination targets through other protein interaction domains (Jin et al., 2004 [PubMed 15520277]).[supplied by OMIM, Mar 2008] External Links: Ensembl ID: ENSG00000108306 HGNC ID: HGNC:24679 Entrez Gene: 84961

Expression Profile of FBXL20 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-128-3p YES YES NO hsa-miR-1297 NO YES YES hsa-miR-132-3p NO YES YES hsa-miR-140-3p YES NO YES hsa-miR-141-3p YES YES YES hsa-miR-15a-5p NO YES YES hsa-miR-15b-5p NO YES YES hsa-miR-16-5p NO YES YES hsa-miR-185-5p YES YES YES hsa-miR-195-5p NO YES YES hsa-miR-200a-3p YES YES YES hsa-miR-200b-3p YES YES NO hsa-miR-200c-3p YES YES NO hsa-miR-212-3p NO YES YES hsa-miR-26a-5p NO YES YES hsa-miR-26b-5p NO YES YES hsa-miR-27a-3p NO YES YES hsa-miR-27b-3p NO YES YES hsa-miR-29a-3p NO YES YES hsa-miR-29b-3p NO YES YES hsa-miR-29c-3p NO YES YES hsa-miR-30a-5p YES YES YES hsa-miR-30b-5p YES YES YES hsa-miR-30c-5p YES YES YES hsa-miR-30d-5p YES YES YES hsa-miR-30e-5p YES YES YES hsa-miR-326 YES YES YES hsa-miR-330-5p YES YES YES hsa-miR-378a-3p YES NO YES hsa-miR-422a YES NO YES hsa-miR-424-5p NO YES YES hsa-miR-429 YES YES NO hsa-miR-455-3p YES NO YES hsa-miR-490-3p NO YES YES hsa-miR-497-5p NO YES YES hsa-miR-542-3p YES YES YES hsa-miR-760 YES NO YES Display: