ctcRbase

Entry Detail

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General Information

Database ID: SKCM07995 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: NID1 Full Name: nidogen 1 Category: mRNA Synonyms: NID Chromosome: chr1 Strand: - Coordinate: Start Site(bp): 235975830 End Site(bp): 236065162 Gene Summary: This gene encodes a member of the nidogen family of basement membrane glycoproteins. The protein interacts with several other components of basement membranes, and may play a role in cell interactions with the extracellular matrix. [provided by RefSeq, Jul 2008] External Links: Ensembl ID: ENSG00000116962 HGNC ID: HGNC:7821 Entrez Gene: 4811

Expression Profile of NID1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-124-3p YES YES YES hsa-miR-128-3p YES YES NO hsa-miR-1297 YES YES YES hsa-miR-140-5p YES YES NO hsa-miR-148a-3p YES YES NO hsa-miR-148b-3p YES YES NO hsa-miR-152-3p YES YES NO hsa-miR-182-5p YES YES YES hsa-miR-185-5p YES YES NO hsa-miR-186-5p YES YES NO hsa-miR-192-5p YES YES NO hsa-miR-197-3p YES YES NO hsa-miR-215-5p YES YES NO hsa-miR-24-3p YES NO YES hsa-miR-26a-5p YES YES YES hsa-miR-26b-5p YES YES YES hsa-miR-28-5p YES YES NO hsa-miR-296-3p YES YES NO hsa-miR-29a-3p YES YES YES hsa-miR-29b-3p YES YES YES hsa-miR-29c-3p YES YES YES hsa-miR-30a-5p YES NO YES hsa-miR-30b-5p YES NO YES hsa-miR-30c-5p YES NO YES hsa-miR-30d-5p YES NO YES hsa-miR-30e-5p YES NO YES hsa-miR-365a-3p YES YES NO hsa-miR-374a-5p YES YES NO hsa-miR-374b-5p YES YES NO hsa-miR-382-5p YES YES NO hsa-miR-384 YES YES NO hsa-miR-433-3p YES YES NO hsa-miR-485-5p YES YES NO hsa-miR-486-5p YES YES NO hsa-miR-503-5p YES YES NO hsa-miR-506-3p YES YES NO hsa-miR-708-5p YES YES NO hsa-miR-9-5p YES YES YES Display: