ctcRbase

Entry Detail

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General Information

Database ID: SKCM08051 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: STX5 Full Name: syntaxin 5 Category: mRNA Synonyms: SED5|STX5A Chromosome: chr11 Strand: - Coordinate: Start Site(bp): 62806897 End Site(bp): 62832088 Gene Summary: This gene encodes a member of the syntaxin or t-SNARE (target-SNAP receptor) family. These proteins are found on cell membranes and serve as the targets for v-SNAREs (vesicle-SNAP receptors), permitting specific synaptic vesicle docking and fusion. The encoded protein regulates endoplasmic reticulum to Golgi transport and plays a critical role in autophagy. Autoantibodies targeting the encoded protein may be a diagnostic marker for endometriosis. Alternatively spliced transcript variants encoding multiple isoforms have been observed for this gene. [provided by RefSeq, Sep 2011] External Links: Ensembl ID: ENSG00000162236 HGNC ID: HGNC:11440 Entrez Gene: 6811

Expression Profile of STX5 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-204-5p YES YES NO hsa-miR-211-5p YES YES NO hsa-miR-24-3p YES NO YES hsa-miR-34a-5p YES YES NO hsa-miR-34c-5p YES YES NO hsa-miR-449a YES YES NO hsa-miR-449b-5p YES YES NO hsa-miR-485-5p YES YES NO hsa-miR-7-5p NO YES YES Display: