ctcRbase

Entry Detail

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General Information

Database ID: SKCM08112 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: KDM3A Full Name: lysine demethylase 3A Category: mRNA Synonyms: JHDM2A|JHMD2A|JMJD1|JMJD1A|TSGA Chromosome: chr2 Strand: + Coordinate: Start Site(bp): 86440647 End Site(bp): 86492716 Gene Summary: This gene encodes a zinc finger protein that contains a jumonji domain and may play a role in hormone-dependent transcriptional activation. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Apr 2009] External Links: Ensembl ID: ENSG00000115548 HGNC ID: HGNC:20815 Entrez Gene: 55818

Expression Profile of KDM3A Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-let-7a-5p YES YES YES hsa-let-7b-5p YES YES YES hsa-let-7c-5p YES YES YES hsa-let-7d-5p YES YES YES hsa-let-7e-5p YES YES YES hsa-let-7f-5p YES YES YES hsa-let-7g-5p YES YES YES hsa-let-7i-5p YES YES YES hsa-miR-101-3p YES YES YES hsa-miR-128-3p YES YES YES hsa-miR-136-5p YES YES YES hsa-miR-141-3p YES YES YES hsa-miR-144-3p YES YES YES hsa-miR-155-5p YES YES NO hsa-miR-186-5p YES YES NO hsa-miR-194-5p YES YES NO hsa-miR-199a-3p YES NO YES hsa-miR-199b-3p YES NO YES hsa-miR-200a-3p YES YES YES hsa-miR-216a-5p YES YES YES hsa-miR-216b-5p YES YES YES hsa-miR-217 YES YES NO hsa-miR-22-3p YES YES YES hsa-miR-224-5p YES YES YES hsa-miR-27a-3p YES YES YES hsa-miR-27b-3p YES YES YES hsa-miR-30a-5p YES YES YES hsa-miR-30b-5p YES YES YES hsa-miR-30c-5p YES YES YES hsa-miR-30d-5p YES YES YES hsa-miR-30e-5p YES YES YES hsa-miR-323a-3p YES NO YES hsa-miR-365a-3p YES YES YES hsa-miR-371a-5p YES YES YES hsa-miR-382-5p YES YES NO hsa-miR-410-3p YES NO YES hsa-miR-486-5p YES YES NO hsa-miR-582-5p YES NO YES hsa-miR-98-5p YES YES YES Display: