ctcRbase

Entry Detail

---



General Information

Database ID: SKCM08138 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: USP38 Full Name: ubiquitin specific peptidase 38 Category: mRNA Synonyms: HP43.8KD Chromosome: chr4 Strand: + Coordinate: Start Site(bp): 143184917 End Site(bp): 143223830 Gene Summary: NA External Links: Ensembl ID: ENSG00000170185 HGNC ID: HGNC:20067 Entrez Gene: 84640

Expression Profile of USP38 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-let-7a-5p YES YES YES hsa-let-7b-5p YES YES YES hsa-let-7c-5p YES YES YES hsa-let-7d-5p YES YES YES hsa-let-7e-5p YES YES YES hsa-let-7f-5p YES YES YES hsa-let-7g-5p YES YES YES hsa-let-7i-5p YES YES YES hsa-miR-101-3p YES YES YES hsa-miR-124-3p YES YES YES hsa-miR-128-3p YES YES NO hsa-miR-129-5p YES YES NO hsa-miR-132-3p YES YES YES hsa-miR-133a-3p YES NO YES hsa-miR-133b YES NO YES hsa-miR-144-3p YES YES YES hsa-miR-148a-3p YES YES YES hsa-miR-148b-3p YES YES YES hsa-miR-152-3p YES YES YES hsa-miR-186-5p YES YES NO hsa-miR-196a-5p YES YES NO hsa-miR-196b-5p YES YES NO hsa-miR-200b-3p YES YES NO hsa-miR-200c-3p YES YES NO hsa-miR-212-3p YES YES YES hsa-miR-217 YES NO YES hsa-miR-33a-5p YES YES NO hsa-miR-33b-5p YES YES NO hsa-miR-340-5p YES YES NO hsa-miR-374a-5p YES YES YES hsa-miR-374b-5p YES YES YES hsa-miR-375 YES YES NO hsa-miR-379-5p YES YES NO hsa-miR-384 YES YES NO hsa-miR-429 YES YES NO hsa-miR-495-3p YES NO YES hsa-miR-506-3p YES YES NO hsa-miR-543 YES YES YES hsa-miR-582-5p YES NO YES hsa-miR-98-5p YES YES YES Display: