ctcRbase

Entry Detail

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General Information

Database ID: SKCM08160 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: BCAS1 Full Name: breast carcinoma amplified sequence 1 Category: mRNA Synonyms: AIBC1|NABC1 Chromosome: chr20 Strand: - Coordinate: Start Site(bp): 53936777 End Site(bp): 54070594 Gene Summary: This gene resides in a region at 20q13 which is amplified in a variety of tumor types and associated with more aggressive tumor phenotypes. Among the genes identified from this region, it was found to be highly expressed in three amplified breast cancer cell lines and in one breast tumor without amplification at 20q13.2. However, this gene is not in the common region of maximal amplification and its expression was not detected in the breast cancer cell line MCF7, in which this region is highly amplified. Although not consistently expressed, this gene is a candidate oncogene. [provided by RefSeq, Apr 2016] External Links: Ensembl ID: ENSG00000064787 HGNC ID: HGNC:974 Entrez Gene: 8537

Expression Profile of BCAS1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-103a-3p YES YES NO hsa-miR-107 YES YES NO hsa-miR-15a-5p YES YES NO hsa-miR-15b-5p YES YES NO hsa-miR-16-5p YES YES NO hsa-miR-195-5p YES YES NO hsa-miR-361-5p NO YES YES hsa-miR-424-5p YES YES NO hsa-miR-497-5p YES YES NO Display: