ctcRbase

Entry Detail

---



General Information

Database ID: SKCM08268 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: YAF2 Full Name: YY1 associated factor 2 Category: mRNA Synonyms: - Chromosome: chr12 Strand: - Coordinate: Start Site(bp): 42157104 End Site(bp): 42238349 Gene Summary: This gene encodes a zinc finger containing protein that functions in the regulation of transcription. This protein was identified as an interacting partner of transcriptional repressor protein Yy1, and also interacts with other transcriptional regulators, including Myc and Polycomb. This protein can promote proteolysis of Yy1. Multiple alternatively spliced transcript variants have been found. [provided by RefSeq, Feb 2016] External Links: Ensembl ID: ENSG00000015153 HGNC ID: HGNC:17363 Entrez Gene: 10138

Expression Profile of YAF2 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-let-7a-5p YES YES YES hsa-let-7b-5p YES YES YES hsa-let-7c-5p YES YES YES hsa-let-7d-5p YES YES YES hsa-let-7e-5p YES YES YES hsa-let-7f-5p YES YES YES hsa-let-7g-5p YES YES YES hsa-let-7i-5p YES YES YES hsa-miR-101-3p YES YES YES hsa-miR-103a-3p YES NO YES hsa-miR-107 YES NO YES hsa-miR-1297 NO YES YES hsa-miR-141-3p YES YES YES hsa-miR-183-5p YES YES YES hsa-miR-186-5p YES YES YES hsa-miR-200a-3p YES YES YES hsa-miR-217 YES YES YES hsa-miR-25-3p YES YES NO hsa-miR-26a-5p NO YES YES hsa-miR-26b-5p NO YES YES hsa-miR-30a-5p YES YES YES hsa-miR-30b-5p YES YES YES hsa-miR-30c-5p YES YES YES hsa-miR-30d-5p YES YES YES hsa-miR-30e-5p YES YES YES hsa-miR-320a YES NO YES hsa-miR-320b YES NO YES hsa-miR-320c YES NO YES hsa-miR-320d YES NO YES hsa-miR-340-5p YES NO YES hsa-miR-367-3p YES YES NO hsa-miR-369-3p YES NO YES hsa-miR-371a-5p YES YES YES hsa-miR-382-5p YES YES NO hsa-miR-410-3p YES YES YES hsa-miR-411-5p YES YES YES hsa-miR-655-3p YES NO YES hsa-miR-92a-3p YES YES NO hsa-miR-98-5p YES YES YES Display: