ctcRbase

Entry Detail

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General Information

Database ID: SKCM08299 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: TAF1A Full Name: TATA-box binding protein associated factor, RNA polymerase I subunit A Category: mRNA Synonyms: MGC:17061|RAFI48|SL1|TAFI48 Chromosome: chr1 Strand: - Coordinate: Start Site(bp): 222557902 End Site(bp): 222589933 Gene Summary: This gene encodes a subunit of the RNA polymerase I complex, Selectivity Factor I (SLI). The encoded protein is a TATA box-binding protein-associated factor that plays a role in the assembly of the RNA polymerase I preinitiation complex. Alternate splicing results in multiple transcript variants encoding multiple isoforms.[provided by RefSeq, Jan 2011] External Links: Ensembl ID: ENSG00000143498 HGNC ID: HGNC:11532 Entrez Gene: 9015

Expression Profile of TAF1A Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-181a-5p YES YES NO hsa-miR-181b-5p YES YES NO hsa-miR-181c-5p YES YES NO hsa-miR-181d-5p YES YES NO hsa-miR-300 YES YES NO hsa-miR-340-5p YES YES NO hsa-miR-34a-5p YES YES NO hsa-miR-34c-5p YES YES NO hsa-miR-381-3p YES YES NO hsa-miR-410-3p YES YES NO hsa-miR-449a YES YES NO hsa-miR-449b-5p YES YES NO Display: