ctcRbase

Entry Detail

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General Information

Database ID: SKCM08312 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: HMCN1 Full Name: hemicentin 1 Category: mRNA Synonyms: ARMD1|FBLN6|FIBL-6|FIBL6 Chromosome: chr1 Strand: + Coordinate: Start Site(bp): 185734551 End Site(bp): 186190949 Gene Summary: This gene encodes a large extracellular member of the immunoglobulin superfamily. A similar protein in C. elegans forms long, fine tracks at specific extracellular sites that are involved in many processes such as stabilization of the germline syncytium, anchorage of mechanosensory neurons to the epidermis, and organization of hemidesmosomes in the epidermis. Mutations in this gene may be associated with age-related macular degeneration. [provided by RefSeq, Jul 2008] External Links: Ensembl ID: ENSG00000143341 HGNC ID: HGNC:19194 Entrez Gene: 83872

Expression Profile of HMCN1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-1271-5p YES YES NO hsa-miR-140-5p YES YES NO hsa-miR-145-5p YES YES NO hsa-miR-182-5p YES YES YES hsa-miR-190a-5p YES YES NO hsa-miR-190b YES YES NO hsa-miR-199a-5p YES YES YES hsa-miR-199b-5p YES YES YES hsa-miR-22-3p YES YES NO hsa-miR-29a-3p YES YES NO hsa-miR-29b-3p YES YES NO hsa-miR-29c-3p YES YES NO hsa-miR-30d-5p YES YES NO hsa-miR-30e-5p YES YES NO hsa-miR-335-5p YES YES NO hsa-miR-340-5p YES YES NO hsa-miR-371a-5p YES YES NO hsa-miR-873-5p YES YES NO hsa-miR-9-5p YES YES NO hsa-miR-96-5p YES YES NO Display: