ctcRbase

Entry Detail

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General Information

Database ID: SKCM08318 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: ZNF638 Full Name: zinc finger protein 638 Category: mRNA Synonyms: NP220|ZFML|Zfp638 Chromosome: chr2 Strand: + Coordinate: Start Site(bp): 71276561 End Site(bp): 71435069 Gene Summary: The protein encoded by this gene is a nucleoplasmic protein. It binds cytidine-rich sequences in double-stranded DNA. This protein has three types of domains: MH1, MH2 (repeated three times) and MH3. It is associated with packaging, transferring, or processing transcripts. Multiple alternatively spliced transcript variants have been found for this gene, but the biological validity of some variants has not been determined. [provided by RefSeq, Jul 2008] External Links: Ensembl ID: ENSG00000075292 HGNC ID: HGNC:17894 Entrez Gene: 27332

Expression Profile of ZNF638 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-101-3p YES YES YES hsa-miR-128-3p NO YES YES hsa-miR-136-5p NO YES YES hsa-miR-139-5p NO YES YES hsa-miR-141-3p YES YES YES hsa-miR-144-3p YES YES YES hsa-miR-200a-3p YES YES YES hsa-miR-205-5p NO YES YES hsa-miR-216a-5p NO YES YES hsa-miR-224-5p NO YES YES hsa-miR-378a-3p YES YES NO hsa-miR-421 NO YES YES hsa-miR-422a YES YES NO hsa-miR-495-3p YES YES YES hsa-miR-543 YES YES NO Display: