Entry Detail



General Information

Database ID:SKCM08388
Cancer Type:melanoma
Dataset:GSE38495
CTCs/CTM Isolation Method:immunomagnetic purification



Gene Information

ncRNA Symbol:LDB3
Full Name:LIM domain binding 3
Category:mRNA
Synonyms:CMD1C|CMH24|CMPD3|CYPHER|LDB3Z1|LDB3Z4|LVNC3|MFM4|ORACLE|PDLIM6|ZASP
Chromosome:chr10
Strand:+
Coordinate:
Start Site(bp):86668449End Site(bp):86736068
Gene Summary:This gene encodes a PDZ domain-containing protein. PDZ motifs are modular protein-protein interaction domains consisting of 80-120 amino acid residues. PDZ domain-containing proteins interact with each other in cytoskeletal assembly or with other proteins involved in targeting and clustering of membrane proteins. The protein encoded by this gene interacts with alpha-actinin-2 through its N-terminal PDZ domain and with protein kinase C via its C-terminal LIM domains. The LIM domain is a cysteine-rich motif defined by 50-60 amino acids containing two zinc-binding modules. This protein also interacts with all three members of the myozenin family. Mutations in this gene have been associated with myofibrillar myopathy and dilated cardiomyopathy. Alternatively spliced transcript variants encoding different isoforms have been identified; all isoforms have N-terminal PDZ domains while only longer isoforms (1, 2 and 5) have C-terminal LIM domains. [provided by RefSeq, Jan 2010]
External Links:
Ensembl ID:ENSG00000122367
HGNC ID:HGNC:15710
Entrez Gene:11155



Expression Profile of LDB3 Gene

 







Regulatory Relationship

mRNA targets:NA
miRNA targets:NA
Display:N/A