ctcRbase

Entry Detail

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General Information

Database ID: SKCM08394 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: EFHD1 Full Name: EF-hand domain family member D1 Category: mRNA Synonyms: MST133|MSTP133|PP3051|SWS2 Chromosome: chr2 Strand: + Coordinate: Start Site(bp): 232606057 End Site(bp): 232682781 Gene Summary: This gene encodes a member of the EF-hand super family of calcium binding proteins, which are involved in a variety of cellular processes including mitosis, synaptic transmission, and cytoskeletal rearrangement. The protein encoded by this gene is composed of an N-terminal disordered region, proline-rich elements, two EF-hands, and a C-terminal coiled-coil domain. This protein has been shown to associate with the mitochondrial inner membrane, and in HeLa cells, acts as a novel mitochondrial calcium ion sensor for mitochondrial flash activation. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jul 2016] External Links: Ensembl ID: ENSG00000115468 HGNC ID: HGNC:29556 Entrez Gene: 80303

Expression Profile of EFHD1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-144-3p YES YES NO hsa-miR-149-5p YES YES NO hsa-miR-214-3p YES YES NO hsa-miR-24-3p YES YES NO hsa-miR-425-5p YES YES NO hsa-miR-454-3p YES YES NO hsa-miR-488-3p YES YES NO hsa-miR-491-5p YES YES NO hsa-miR-7-5p YES YES NO hsa-miR-873-5p YES YES NO Display: