Entry Detail



General Information

Database ID:SKCM08423
Cancer Type:melanoma
Dataset:GSE38495
CTCs/CTM Isolation Method:immunomagnetic purification



Gene Information

ncRNA Symbol:COL27A1
Full Name:collagen type XXVII alpha 1 chain
Category:mRNA
Synonyms:STLS
Chromosome:chr9
Strand:+
Coordinate:
Start Site(bp):114155560End Site(bp):114312511
Gene Summary:This gene encodes a member of the fibrillar collagen family, and plays a role during the calcification of cartilage and the transition of cartilage to bone. The encoded protein product is a preproprotein. It includes an N-terminal signal peptide, which is followed by an N-terminal propetide, mature peptide and a C-terminal propeptide. The N-terminal propeptide contains thrombospondin N-terminal-like and laminin G-like domains. The mature peptide is a major triple-helical region. The C-terminal propeptide, also known as COLFI domain, plays crucial roles in tissue growth and repair. Mutations in this gene cause Steel syndrome. Alternatively spliced transcript variants have been found, but the full-length nature of some variants has not been determined. [provided by RefSeq, Sep 2014]
External Links:
Ensembl ID:ENSG00000196739
HGNC ID:HGNC:22986
Entrez Gene:85301



Expression Profile of COL27A1 Gene

 







Regulatory Relationship

mRNA targets:NA
miRNA targets:NA
Display:N/A